QuickBooks Desktop
Two-Way Integration

Payments, Credits, and Adjustments post automatically into QuickBooks Desktop.

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Trusted by businesses across America.

Your business lives in QuickBooks. Your payments should too.

The ledger you trust never leaves QuickBooks Desktop; Payra just makes keeping it up-to-date effortless.

Collect every invoice

AR invoices flow from QuickBooks Desktop into Payra automatically — alongside your customers, their credit balances, and any adjustments. Whatever you bill, you can collect on it the moment it posts.

Payments that reconcile themselves

When a customer pays, Payra applies the cash in QuickBooks Desktop, even splitting a single payment across multiple invoices. No exports, no manual matching, no end-of-month surprises.

Your invoice, delivered as a PDF

Payra delivers your actual QuickBooks Desktop PDF invoice, pulled straight from your ledger. No re-creating documents, no rekeying — what you bill is exactly what your customer sees and pays.

Books that stay audit-clean

Processing fees post to their own GL account. Refunds and voids sync back to QuickBooks Desktop. Advance payments and credit balances stay accurate on both sides. Your finances always stay reconciled.

All modules inside

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AR Invoicing
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Customers
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Multi-entity Support
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Refunds / Voids
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Advanced Payments
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Work Orders
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Payments
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Bulk import
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GL Posting
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Batches
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Sales Orders

What Payra automates inside QuickBooks Desktop

Native PDF Invoicing

Created in QuickBooks Desktop and delivered electronically via Payra. Payra is the only solution that delivers your QuickBooks Desktop pdf invoice. Your AR invoices are delivered exactly as they appear in QuickBooks Desktop.

Automated Cash Application

Get hours of your week back with automated cash applications from all payment types – card, check, and ACH. No more double entry of transactions, letting you get back to the work that truly matters.

Credit Balances & Memos

Apply and manage credit memos on customers in QuickBooks Desktop or Payra. Customers can see their balances in your white-labeled client portal, a single source of truth.

Adjustments that stay in sync

Invoice adjustments made in QuickBooks Desktop flow into Payra so balances always match. Whatever changes on the ledger is reflected in what your customer owes — no stale invoices, no reconciliation gaps.

Live in 3 weeks

See how the only real time QuickBooks Desktop integration works.

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Connect

Payra connects to your QuickBooks Desktop instance and pulls in customers, invoices, transactions, and more.

Approve

Interact and verify your real data in Payra. Check customers, balances, and more. Have full confidence that the systems mirror each other.

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Deploy

Payra is synced with your live environment and payments are being collected and posted in real time! The whole process takes 3 weeks.

Why Payra

Enterprise-grade, built to move transactions of any size

What you can expect from Payra:

40%

Reduction in DSO

3 weeks

Average time to go fully live

99%

Automatic cash application match rate

75%

Reduction in customer calls and follow-ups

Security

Enterprise-grade security. Built in from day one.

Your data is protected, your transactions are secure, and your customers can trust the experience on every interaction.

FAQs

Do you offer training?

Yes - we build a training schedule after contract signature to ensure your team is prepared for the daily use of Payra. We have 100% USA based support that is available for any need you have.

Do I need IT or a developer to set it up?

No. Payra's implementation team handles the integration setup. Most customers are live within 3 weeks. There is no internal development work required.

How many people can I add to Payra?

We don’t limit the number of users in your system, nor do we charge more for more users. Give access to your entire team with specific role permissions.

Will payments automatically reconcile in QuickBooks Desktop?

Yes. Payments processed through Payra are automatically matched and posted to the correct QuickBooks Desktop GL accounts, eliminating manual reconciliation and reducing the risk of posting errors.

Does Payra work with our existing QuickBooks Desktop chart of accounts?

Yes. During onboarding, Payra maps to your existing GL structure so payments post to the right accounts without requiring any changes to your QuickBooks Desktop setup.

Is payment data visible inside QuickBooks Desktop, or do I have to switch between systems?

Payment status, history, and remittance details are accessible directly within QuickBooks Desktop — your team doesn't need to log into a separate portal to see what's been paid.

Get Started

See how Payra works inside your ERP

15 minutes. No commitment. We'll show you the exact integration with your ERP and a realistic path to go live.

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